PROTAC-Splitter

Published:

Source code for PROTAC-Splitter (Journal of Cheminformatics, 2026): a Transformer model and a graph-based XGBoost model for annotating PROTAC substructures, combined in an adaptive strategy, together with the synthetic corpus of ~1.3M annotated PROTACs used to train them.

See the full write-up for the paper, approach and citation.

Link to paper.